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Table 3 Consensus statistics: number of sequences (total, contigs, and singletons) with a BLAST hit against reference databases, and number of consensus sequences generated

From: Reptilian-transcriptome v1.0, a glimpse in the brain transcriptome of five divergent Sauropsida lineages and the phylogenetic position of turtles

 

Gallus

Crocodylus

Elaphe

Pogona

Trachemys

Input seq with BLAST hit

88,754

45,773

36,241

54,284

37,180

   Contigs

35,330

18,505

13,530

24,981

17,534

   Singletons

53,424

27,268

22,711

29,303

19,646

Consensus sequences

31,021

24,676

20,016

26,203

20,897

   One-to-one consensus

17,885

19,617

15,701

18,802

17,728

   >50% coverage

3,505

7,114

1,233

2,372

1,346