Table 1 B. floridae bHLH-PAS gene models and identified cDNA clones

NCOA (SRC)

212110 (1.42e^-62)

N/A

KC305624

3,004^b

Yes (1911 nt)

NCOA2 (Q15596.2)

BfNcoa

Bb, NCOA (JN831351.1) [58]

ARNT

124387 (4.79e^-179)

01670 (1e^-63)

KC305625

3,418^b

Yes (2139 nt)

ARNT2 (AAG15310.1)

BfArnt

orphan^c

117200; 125569

16184

KC305626

2,659^b

Yes (2418 nt)

BMAL1e (BAA19938.1)

BfbHLHPAS-orphan

Clock

63636 (3.72e^-137); 63642 (6.95e^-109)

N/A

KC305627

2,425^b

No (2343 nt)

CLOCK (O15516.1)

BfClock

Bmal/cycle

110703 (0e⁰); 96140 (8.13e^-77)

N/A

KC305628

1,782^b

No (1782 nt)

MOP3 (BMAL1) (AAC51213.1)

BfBmal

Bl, amphiBmal[60]

AHR

235977 (4.04e^-79); 98840 (5.68e^-14)

N/A

KC305629

1,047^b

No (915 nt)

AHR (BAA03857.1)

BfAhr

NPAS4/dysfusion

121518 (3.54e^-66)

N/A

KC305630

2,529

No (2526 nt)

NPAS4 (NP_849195.2)

BfNpas4

Sim

265033 (0e⁰)

N/A

KC305631

999

No (996 nt)

SIM1 (P81133.2)

BfSim

Bf, AmphiSim (AJ506161.1) [55]

Trh

220692 (1.75e^-53); 220681 (4.62e^-48); 163191 (1.73e^-24); 220639 (4.06e^-23) and others

N/A

KC305632

1,176^b

No (1104 nt)

NPAS3 transcript variant 1 (AAO17043.1)

BfNpas1/3

HIF

208339 (5.04e^-114); 208408 (1.73e^-105)

13696 (5e^-55); 04181 (4e^-51); 00128 (3e^-46)

KC305633

4,514^b,d;

Yes (2676 nt)

HIF1A (NP_851397.1)

BfHifα

Bj, Hifα (HM188448- HM188451) [59]

KC305634

2,809^b,d

Yes (2589 nt)

HIF1A (NP_851397.1)

BfHifα