Family name | Protein ID (Expect value) | cDNA cluster ID (Expect value) | Accession number | cDNA length (nt) | Full length coding sequence | Best hit human protein | Name given after phylogenetic analyses | Related reportsa |
---|---|---|---|---|---|---|---|---|
NCOA (SRC) | 212110 (1.42e-62) | N/A | KC305624 | 3,004b | Yes (1911Â nt) | NCOA2 (Q15596.2) | BfNcoa | Bb, NCOA (JN831351.1) [58] |
ARNT | 124387 (4.79e-179) | 01670 (1e-63) | KC305625 | 3,418b | Yes (2139Â nt) | ARNT2 (AAG15310.1) | BfArnt | Â |
orphanc | 117200; 125569 | 16184 | KC305626 | 2,659b | Yes (2418Â nt) | BMAL1e (BAA19938.1) | BfbHLHPAS-orphan | Â |
Clock | 63636 (3.72e-137); 63642 (6.95e-109) | N/A | KC305627 | 2,425b | No (2343Â nt) | CLOCK (O15516.1) | BfClock | Â |
Bmal/cycle | 110703 (0e0); 96140 (8.13e-77) | N/A | KC305628 | 1,782b | No (1782Â nt) | MOP3 (BMAL1) (AAC51213.1) | BfBmal | Bl, amphiBmal[60] |
AHR | 235977 (4.04e-79); 98840 (5.68e-14) | N/A | KC305629 | 1,047b | No (915Â nt) | AHR (BAA03857.1) | BfAhr | Â |
NPAS4/dysfusion | 121518 (3.54e-66) | N/A | KC305630 | 2,529 | No (2526Â nt) | NPAS4 (NP_849195.2) | BfNpas4 | Â |
Sim | 265033 (0e0) | N/A | KC305631 | 999 | No (996Â nt) | SIM1 (P81133.2) | BfSim | Bf, AmphiSim (AJ506161.1) [55] |
Trh | 220692 (1.75e-53); 220681 (4.62e-48); 163191 (1.73e-24); 220639 (4.06e-23) and others | N/A | KC305632 | 1,176b | No (1104Â nt) | NPAS3 transcript variant 1 (AAO17043.1) | BfNpas1/3 | Â |
HIF | 208339 (5.04e-114); 208408 (1.73e-105) | 13696 (5e-55); 04181 (4e-51); 00128 (3e-46) | KC305633 | 4,514b,d; | Yes (2676 nt) | HIF1A (NP_851397.1) | BfHifα | Bj, Hifα (HM188448- HM188451) [59] |
 |  |  | KC305634 | 2,809b,d | Yes (2589 nt) | HIF1A (NP_851397.1) | BfHifα |  |