Table 1 Top 20 most abundant mRNA transcripts expressed in 1–2 cell stage embryos of A. limnaeus
Gene symbol | Gene description | Gene type | Expression (FPKM) |
|---|---|---|---|
COI | Cytochrome C oxidase I a | Protein coding | 8491 |
16S | 16 s ribosomal RNA a | rRNA | 7635 |
LOC106526789 | Ferritin, middle subunit | Protein coding | 5782 |
LOC106522651 | Uncharacterized | lncRNA | 5697 |
COIII | Cytochrome C oxidase III a | Protein coding | 5017 |
LOC106523488 | Claudin-like protein, ZF-A89 | Protein coding | 4858 |
LOC106532313 | Uncharacterized | lncRNA | 4619 |
LOC106518911 | Uncharacterized | lncRNA | 4331 |
LOC106512296 | Uncharacterized | lncRNA | 4322 |
LOC106533547 | Late histone H2B.L4-like | Protein coding | 4219 |
LOC106530205 | Ribosyldihydronicotinamide dehydrogenase [quinone] | Pseudogene | 3774 |
LOC106512721 | Uncharacterized | lncRNA | 3752 |
LOC106511212 | Zinc finger protein 36, C3H1 type-like 2 | Protein coding | 3561 |
LOC106527827 | Peptidyl-prolyl cis–trans isomerase-like | Protein coding | 3539 |
LOC106519960 | Tubulin alpha chain-like | Protein coding | 3403 |
ATPase6 | ATP synthase 6 a | Protein coding | 3270 |
ubb | Ubiquitin B | Protein coding | 3259 |
LOC106532441 | Ribosyldihydronicotinamide dehydrogenase [quinone]-like | Protein coding | 3078 |
LOC106526526 | Tumor-associated calcium signal transducer 2-like | Protein coding | 3042 |
hspb1 | Heat-shock 27-kDa protein 1 | Protein coding | 3011 |