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Table 1 Top 20 most abundant mRNA transcripts expressed in 1–2 cell stage embryos of A. limnaeus

From: Transcriptomic analysis of maternally provisioned cues for phenotypic plasticity in the annual killifish, Austrofundulus limnaeus

Gene symbol Gene description Gene type Expression (FPKM)
COI Cytochrome C oxidase I a Protein coding 8491
16S 16 s ribosomal RNA a rRNA 7635
LOC106526789 Ferritin, middle subunit Protein coding 5782
LOC106522651 Uncharacterized lncRNA 5697
COIII Cytochrome C oxidase III a Protein coding 5017
LOC106523488 Claudin-like protein, ZF-A89 Protein coding 4858
LOC106532313 Uncharacterized lncRNA 4619
LOC106518911 Uncharacterized lncRNA 4331
LOC106512296 Uncharacterized lncRNA 4322
LOC106533547 Late histone H2B.L4-like Protein coding 4219
LOC106530205 Ribosyldihydronicotinamide dehydrogenase [quinone] Pseudogene 3774
LOC106512721 Uncharacterized lncRNA 3752
LOC106511212 Zinc finger protein 36, C3H1 type-like 2 Protein coding 3561
LOC106527827 Peptidyl-prolyl cistrans isomerase-like Protein coding 3539
LOC106519960 Tubulin alpha chain-like Protein coding 3403
ATPase6 ATP synthase 6 a Protein coding 3270
ubb Ubiquitin B Protein coding 3259
LOC106532441 Ribosyldihydronicotinamide dehydrogenase [quinone]-like Protein coding 3078
LOC106526526 Tumor-associated calcium signal transducer 2-like Protein coding 3042
hspb1 Heat-shock 27-kDa protein 1 Protein coding 3011
  1. FPKM Fragments per kilobase of transcript per million mapped reads
  2. aMitochondrially encoded gene