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Fig. 3 | EvoDevo

Fig. 3

From: Duplication of spiralian-specific TALE genes and evolution of the blastomere specification mechanism in the bivalve lineage

Fig. 3

The number and genomic locations of A/C-clade SPILE genes in molluscs. The number of genes included homeodomain sequences that were not predicted to be genes. The phylogenetic relationships were based on previous studies [34, 58, 59]. Black squares on the line: predicted gene models. Grey squares on the line: SPILE-A/C clade homeodomains extracted from the genomic sequence (not predicted to be genes). Black squares: genes predicted by transcriptomic analysis. Genes located in the same scaffold/chromosome sequence that form a clade in phylogenetic analysis (bootstrap values ≥ 80% in Additional file 1: Fig. S9–12) are highlighted in yellow. Genes in a clade supported by bootstrap values ≥ 50% (Additional file 1: Fig. S9–12) are indicated by dashed lines. * Gene model pfu_aug2.0_460.1_00771.t1 included two distinct homeodomains (PfTALEHD12 and 13; Additional file 2: Table S2). M. yes: Mizuhopecten yessoensis, P. max: Pecten maximus, C. gig: Crassostrea gigas, C. vir: Crassostrea virginica, P. fuc: Pinctada fucata, M. cor: Mytilus coruscus, M. vir: Mytilisepta virgata, L. gig: Lottia gigantea, N. fus: Nipponacmea fuscoviridis, H. dis: Haliotis discus hannai, G. aeg: Gigantopelta aegis, C. squ: Chrysomallon squamiferum, A. gra: Acanthopleura granulata

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