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Figure 1 | EvoDevo

Figure 1

From: Expression of the Lhx genes apterous and lim1 in an errant polychaete: implications for bilaterian appendage evolution, neural development, and muscle diversification

Figure 1

Maximum Likelihood phylogeny of the LIM-homeodomain family, rooted with four other homeodomain families. Robust support was found for all subfamilies. The Neanthes lim1 and apterous orthologs are highlighted with colored boxes. The four support values at each node are, in order: Maximum Likelihood bootstrap percentage, Bayesian posterior probability, Maximum Parsimony bootstrap percentage, and Minimum Evolution bootstrap percentage. Only values ≥50 are shown. Branch lengths are proportional to molecular change (amino acid substitutions/site) between nodes; see scale bar for measurement. Lengths of the interrupted branches were halved to improve the figure’s presentation. Vertebrate subfamily names precede Drosophila subfamily names to the right of each bracket. GenBank accession numbers for the analyzed sequences, in order from top to bottom of the tree, are: XP_790548, NP_001020338, NP_002307, NP_001083902, NP_001071756, NP_508204, NP_648567, ACA04473, NP_571291, NP_071758, BAH58087, XP_001945631, NP_572505, AEN75258, ABD59002, XP_002591838, NP_001158395, ACA04748, NP_001130018, EAW91078, XP_973330, NP_724161, XP_001638136, NP_476775, NP_001158279, NP_665804, ACI69553, XP_002609922, ABO93221, NP_001158468, XP_785118, XP_002609417, XP_001626470, XP_971202, NP_523907, NP_001004015, NP_001015899, CAA04012, AAV84105, XP_392622, NP_001139341, NP_001158443, XP_002592485, XP_001635417, AEN75257, NP_001014434, NP_001035099, NP_523862, ACN66454, AAV85467, ABD37012.

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